Using FLUX for microbiome analysis

Lessons:

  1. Lesson 01 Getting started
  2. Lesson 02 Logging in
  3. Lesson 03 Running flux jobs
  4. Lesson 04 Running mothur on flux
  5. Lesson 05 Executing many jobs with loops and arrays

What is FLUX?

FLUX is University of Michigan’s High Performance Computing cluster. It is maintained by ARC-TS. ARC-TS runs frequent workshops on how to use FLUX. This tutorial serves as a supplement to their HPC101 course with specific examples of how to run mothur and some additional tricks.

Getting flux help:

The flux support at UM is terrific! If you’re having an issue or you want to have some software installed on flux, send them an email at flux-support@umich.edu

Contributors:

This repo is maintained by Michelle Berry